Examples¶
General examples¶
Short examples for some of the methods.
Notebook examples¶
Notebooks containing some longer example systems.
Documentation
- Dimension reduction
- Deep dim reduction
- SINDy
- Markov state models
- Hidden Markov Models
- Clustering
- Examples
- General examples
- 2D contours from xyz
- 2D densities from xy
- Chapman-Kolmogorov test
- Clustering methods comparison
- Coherent sets: Kernel CCA on the Bickley jet
- Energy surface
- Gross and net flux on the Drunkard’s walk
- Implied timescales
- Kernel CCA on the sqrt-Model to transform data
- Network plots
- PCCA+ on the Drunkard’s walk
- SINDy: Identification of the Rössler system
- TRAM on a 1D double well
- TV Derivative
- VAMP on Position Based Fluids
- VAMP vs. TICA vs. PCA
- Notebook examples
- General examples
- Datasets
- For developers
API docs
- deeptime.base
- deeptime.clustering
- deeptime.sindy
- deeptime.covariance
- deeptime.decomposition
- deeptime.markov
- deeptime.markov.hmm
- deeptime.markov.tools
- deeptime.basis
- deeptime.kernels
- deeptime.data
- deeptime.plots
- deeptime.numeric
- deeptime.util
Other
Version
Related Topics
- Documentation overview
- Previous: Clustering
- Next: 2D contours from xyz
